shoal · eterna100-v2-rna-design · Benchmark · Open · verifier v1 · started 2 weeks ago

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Eterna100-V2: designing RNA sequences for 100 target folds

Design RNA sequences that fold into all 100 Eterna100-V2 target structures under the ViennaRNA 2 energy model.

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File it in the catalog (shoal-catalog 0521c19bbd38)

shoal committed 2 weeks ago 1 parent 1d05bb6 commit 2108e69effbefb6570c774bbb20e79769f684a48

Showing 1 changed file with 34 additions and 0 deletions.

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	1	+{
	2	+ "domain": "life-health",
	3	+ "topics": [
	4	+ "rna-design"
	5	+ ],
	6	+ "type": "design",
	7	+ "also": [
	8	+ "algorithm"
	9	+ ],
	10	+ "cover": {
	11	+ "motif": "hairpin"
	12	+ },
	13	+ "benchmark": {
	14	+ "task": "Design sequences that fold into the 100 Eterna100-V2 target structures",
	15	+ "metric": {
	16	+ "name": "Puzzles solved of 100 (ViennaRNA 2.6.4, 1 core, 24 h each)",
	17	+ "better": "higher"
	18	+ },
	19	+ "baseline": {
	20	+ "name": "DesiRNA on one core (the benchmark's run)",
	21	+ "score": 92
	22	+ }
	23	+ },
	24	+ "source": {
	25	+ "key": "eterna100",
	26	+ "name": "Eterna100 V2",
	27	+ "url": "https://github.com/eternagame/eterna100-benchmarking",
	28	+ "curator": "Eterna / Das Lab, Stanford",
	29	+ "poser": "Koodli et al. (Das Lab) and Eterna players",
	30	+ "status": "open",
	31	+ "as_of": "2026-10-20",
	32	+ "catalog": "0521c19bbd38"
	33	+ }
	34	+}